{"id":14,"date":"2023-08-21T10:38:29","date_gmt":"2023-08-21T10:38:29","guid":{"rendered":"https:\/\/thomascmclean.com\/?page_id=14"},"modified":"2024-08-05T13:24:49","modified_gmt":"2024-08-05T13:24:49","slug":"publications","status":"publish","type":"page","link":"https:\/\/www.thomascmclean.com\/?page_id=14","title":{"rendered":"Publications"},"content":{"rendered":"\n<p class=\"wp-block-paragraph\"><strong>2024<\/strong><\/p>\n\n\n\n<p class=\"has-small-font-size wp-block-paragraph\"><a href=\"https:\/\/www.biorxiv.org\/content\/10.1101\/2024.02.16.579611v1\" data-type=\"link\" data-id=\"https:\/\/www.biorxiv.org\/content\/10.1101\/2024.02.16.579611v1\"><strong>McLean, T.C.*<\/strong>, Balaguer-P\u00e9rez F*, Chandanani J* <em>et al<\/em>. &#8216;Molecular switching of a DNA-sliding clamp to a repressor mediates long-range gene silencing&#8217;, <em>bioRxiv<\/em>. doi:10.1101\/2024.02.16.579611<\/a><\/p>\n\n\n\n<p class=\"has-small-font-size wp-block-paragraph\"><a href=\"https:\/\/www.biorxiv.org\/content\/10.1101\/2024.02.05.579024v1.full\" data-type=\"link\" data-id=\"https:\/\/www.biorxiv.org\/content\/10.1101\/2024.02.05.579024v1.full\">Elg, C.A. <em>et al<\/em>. (2024) \u2018Evolution of a plasmid regulatory circuit ameliorates plasmid fitness cost&#8217;, <em>bioRxiv<\/em>. doi:10.1101\/2024.02.05.579024.<\/a><\/p>\n\n\n\n<p class=\"has-small-font-size wp-block-paragraph\"><a href=\"https:\/\/www.microbiologyresearch.org\/content\/journal\/micro\/10.1099\/mic.0.001473#tab2\" data-type=\"link\" data-id=\"https:\/\/www.microbiologyresearch.org\/content\/journal\/micro\/10.1099\/mic.0.001473#tab2\"><strong>McLean, T.C.<\/strong> (2024) \u2018LazyAF, a pipeline for accessible medium-scale <em>in silico<\/em> prediction of protein-protein interactions&#8217;, <em>Microbiology<\/em>, 170(7). doi:10.1099\/mic.0.001473.<\/a><\/p>\n\n\n\n<p class=\"has-medium-font-size wp-block-paragraph\"><strong>2023<\/strong><\/p>\n\n\n\n<p class=\"has-small-font-size wp-block-paragraph\"><a href=\"https:\/\/www.microbiologyresearch.org\/content\/journal\/micro\/10.1099\/mic.0.001358\" data-type=\"link\" data-id=\"https:\/\/www.microbiologyresearch.org\/content\/journal\/micro\/10.1099\/mic.0.001358\"><strong>McLean, T.C.*, <\/strong>Beaton, A.D.M.*<strong> <\/strong><em>et al.<\/em> (2023) \u2018Evidence of a role for CutRS and Actinorhodin in the secretion stress response in <em>Streptomyces coelicolor<\/em> M145\u2019, <em>Microbiology<\/em>, 169(7). doi:10.1099\/mic.0.001358.<\/a><\/p>\n\n\n\n<p class=\"has-small-font-size wp-block-paragraph\"><a href=\"https:\/\/www.sciencedirect.com\/science\/article\/pii\/S1369527423000267\" data-type=\"link\" data-id=\"https:\/\/www.sciencedirect.com\/science\/article\/pii\/S1369527423000267\"><strong>McLean, T.C.<\/strong> and Le, T.B. (2023) \u2018CTP switches in parAB<em>S<\/em>-mediated bacterial chromosome segregation and beyond\u2019, <em>Current Opinion in Microbiology<\/em>, 73, p. 102289. doi:10.1016\/j.mib.2023.102289<\/a><\/p>\n\n\n\n<p class=\"has-medium-font-size wp-block-paragraph\"><strong>2022<\/strong><\/p>\n\n\n\n<p class=\"has-small-font-size wp-block-paragraph\"><a href=\"https:\/\/www.ncbi.nlm.nih.gov\/pmc\/articles\/PMC9455695\/\" data-type=\"link\" data-id=\"https:\/\/www.ncbi.nlm.nih.gov\/pmc\/articles\/PMC9455695\/\">Feeney, M.A. <em>et al.<\/em> (2022) \u2018ActinoBase: Tools and protocols for researchers working on <em>Streptomyces<\/em> and other filamentous actinobacteria\u2019, <em>Microbial Genomics<\/em>, 8(7). doi:10.1099\/mgen.0.000824<\/a><\/p>\n\n\n\n<p class=\"has-medium-font-size wp-block-paragraph\"><strong>2020<\/strong><\/p>\n\n\n\n<p class=\"has-small-font-size wp-block-paragraph\"><a href=\"https:\/\/www.ncbi.nlm.nih.gov\/pmc\/articles\/PMC7641383\/\" data-type=\"link\" data-id=\"https:\/\/www.ncbi.nlm.nih.gov\/pmc\/articles\/PMC7641383\/\">Prudence, S.M.M. <em>et al.<\/em> (2020) \u2018Advances in actinomycete research: An actinobase review of 2019\u2019, <em>Microbiology<\/em>, 166(8), pp. 683\u2013694. doi:10.1099\/mic.0.000944<\/a><\/p>\n\n\n\n<p class=\"has-medium-font-size wp-block-paragraph\"><strong>2019<\/strong><\/p>\n\n\n\n<p class=\"has-small-font-size wp-block-paragraph\"><a href=\"https:\/\/www.microbiologyresearch.org\/content\/journal\/micro\/10.1099\/mic.0.000817\" data-type=\"link\" data-id=\"https:\/\/www.microbiologyresearch.org\/content\/journal\/micro\/10.1099\/mic.0.000817\"><strong>McLean, T.C.<\/strong>, Lo, R., <em>et al.<\/em> (2019) \u2018Sensing and responding to diverse extracellular signals: An updated analysis of the sensor kinases and response regulators of <em>Streptomyces<\/em> species\u2019, <em>Microbiology<\/em>, 165(9), pp. 929\u2013952. doi:10.1099\/mic.0.000817<\/a><\/p>\n\n\n\n<p class=\"has-small-font-size wp-block-paragraph\"><a href=\"https:\/\/www.mdpi.com\/2079-6382\/8\/2\/83\" data-type=\"link\" data-id=\"https:\/\/www.mdpi.com\/2079-6382\/8\/2\/83\"><strong>McLean, T.C.<\/strong> <em>et al.<\/em> (2019) \u2018Dissolution of the disparate: Co-ordinate regulation in antibiotic biosynthesis\u2019, <em>Antibiotics<\/em>, 8(2), p. 83. doi:10.3390\/antibiotics8020083<\/a><\/p>\n\n\n\n<p class=\"has-medium-font-size wp-block-paragraph\"><strong>2017<\/strong><\/p>\n\n\n\n<p class=\"has-small-font-size wp-block-paragraph\"><a href=\"https:\/\/journals.plos.org\/plospathogens\/article?id=10.1371\/journal.ppat.1006666\" data-type=\"link\" data-id=\"https:\/\/journals.plos.org\/plospathogens\/article?id=10.1371\/journal.ppat.1006666\">Herod, M.R. <em>et al.<\/em> (2017) \u2018Genetic economy in Picornaviruses: Foot-and-mouth disease virus replication exploits alternative precursor cleavage pathways\u2019, <em>PLOS Pathogens<\/em>, 13(10). doi:10.1371\/journal.ppat.1006666<\/a><\/p>\n\n\n\n<p class=\"wp-block-paragraph\"><strong>2016<\/strong><\/p>\n\n\n\n<p class=\"has-small-font-size wp-block-paragraph\"><a href=\"https:\/\/journals.asm.org\/doi\/full\/10.1128\/msphere.00305-16\" data-type=\"link\" data-id=\"https:\/\/journals.asm.org\/doi\/full\/10.1128\/msphere.00305-16\"><strong>McLean, T.C.<\/strong>, Hoskisson, P.A. and Seipke, R.F. (2016) \u2018Coordinate regulation of antimycin and candicidin biosynthesis\u2019, <em>mSphere<\/em>, 1(6). doi:10.1128\/msphere.00305-16<\/a><\/p>\n\n\n\n<p class=\"wp-block-paragraph\"><\/p>\n","protected":false},"excerpt":{"rendered":"<p>2024 McLean, T.C.*, Balaguer-P\u00e9rez F*, Chandanani J* et al. &#8216;Molecular switching of a DNA-sliding clamp to a repressor mediates long-range gene silencing&#8217;, bioRxiv. doi:10.1101\/2024.02.16.579611 Elg, C.A. et al. (2024) \u2018Evolution of a plasmid regulatory circuit ameliorates plasmid fitness cost&#8217;, bioRxiv. doi:10.1101\/2024.02.05.579024. McLean, T.C. (2024) \u2018LazyAF, a pipeline for accessible medium-scale in silico prediction of protein-protein [&hellip;]<\/p>\n","protected":false},"author":1,"featured_media":0,"parent":0,"menu_order":0,"comment_status":"closed","ping_status":"closed","template":"","meta":{"footnotes":""},"class_list":["post-14","page","type-page","status-publish","hentry"],"_links":{"self":[{"href":"https:\/\/www.thomascmclean.com\/index.php?rest_route=\/wp\/v2\/pages\/14","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/www.thomascmclean.com\/index.php?rest_route=\/wp\/v2\/pages"}],"about":[{"href":"https:\/\/www.thomascmclean.com\/index.php?rest_route=\/wp\/v2\/types\/page"}],"author":[{"embeddable":true,"href":"https:\/\/www.thomascmclean.com\/index.php?rest_route=\/wp\/v2\/users\/1"}],"replies":[{"embeddable":true,"href":"https:\/\/www.thomascmclean.com\/index.php?rest_route=%2Fwp%2Fv2%2Fcomments&post=14"}],"version-history":[{"count":2,"href":"https:\/\/www.thomascmclean.com\/index.php?rest_route=\/wp\/v2\/pages\/14\/revisions"}],"predecessor-version":[{"id":36,"href":"https:\/\/www.thomascmclean.com\/index.php?rest_route=\/wp\/v2\/pages\/14\/revisions\/36"}],"wp:attachment":[{"href":"https:\/\/www.thomascmclean.com\/index.php?rest_route=%2Fwp%2Fv2%2Fmedia&parent=14"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}